DejaVu
Bioinformatics Paris Descartes
Université Paris Descartes , Institut Imagine
DejaVu Interface
Stats:
Nb Projects
Nb Exomes
Nb Genomes
Nb Ciliomes
Nb Target Genes
Nb Samples
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Used Build
HG19
Annot Version
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Use version:
This is the LAST annotation version.
Research
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Nb Var
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Nb DejaVu Composite
Click HeComp tab to run analysis
Login
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Authorized Project(s)
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BY VARIANT
VAR ID
(Ex: 7_92383888_A_C)
BY GENE
ENSEMBL ID
(Ex: ENSG00000105810)
or
GENE NAME
(Ex: CDK6)
BY TRANSCRIPT
ENSEMBL ID
(Ex: ENST00000518655)
BY REGION
CHR:START-END
(Ex: 1:1-75000, for chr 1 from position 1 to 75.000)
TEXT SEARCH :
Run
No Filter
Show Large Deletion
Ho
Ho Exclusive
XLS Results
XLS He Comp
Alamut
Id:
N.A.
Chr:
N.A.
Pos:
N.A.
rsName:
N.A.
dbSNP Freq:
N.A.
Gene
Gene description
Transcript
Protein
Exon
Cdna pos
Cds pos
Prot pos
Nomenclature
Consequence
Polyphen Status
Sift Status
FILTERS
Show All
Apply filters
A
B
[Not Exonic]
Intergenic
Intronic
[No-Coding RNA]
Pseudogene
ncRNA
Mature miRNA
[Utr, Splicing]
Utr
Splice Region
Splice Acc/Don
[Coding with consequence]
Missense
Frameshift
Stop-gained
(Start/Stop)-lost
[Coding without consequence]
Synonymous
No-frameshift
You look at composite heterozygote of
None...
Access
Variation 1
Consequence 1
HGMD Class 1
Variation 2
Consequence 2
HGMD Class 2
Nb Project(s)
Nb Patient(s)
Access
Var ID or rsName
Position
Nb Project(s)
Nb Patient(s)
Nb Ho
Nb He
Freq. dbSnp
gAD AC
gAD HO
gAD Max
gAD Min
gAD AN
Type
Consequence
Gene(s)
Polyphen Status
Sift Status
Cadd Score
NCboost
HGMD
Project(s) Phenotype(s)
Username
Password
Sign in
[
Not Authorized Project:
0
Authorized Project:
0
]
Project name
Owner(s)
Patient(s) with this variation
[
Not Authorized Patient(s):
0
Authorized Patient(s):
0
]
Gene:
N.A.
Id:
N.A.
Chr:
N.A.
Pos:
N.A.
rsName:
N.A.
dbSNP Freq:
N.A.
Alamut
Min DP:
N.A.
Max DP:
N.A.
Mean DP:
N.A.
Acc
Project Name
Family
Patient
Sex / Status
Ho / He
Run ID
Machine
Capture
Contacts
IGV
Contact(s):
first, click to a patient row...
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